Survival-associated meQTLs across different cancer types


We identified 23,432 meQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "BLCA"
e.g., "rs11600543"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
KIRP rs7219423 chr17:80840172 G/C 2.99E-6 285 26.28 22.8 16.77 KM Plot
KIRP rs7220642 chr17:80840245 C/G 2.99E-6 285 26.28 22.8 16.77 KM Plot
KIRP rs7221057 chr17:80840138 A/G 1.51E-6 281 26.37 22.8 16.77 KM Plot
KIRP rs722302 chr1:231480152 A/C 0.00013 283 21.28 25.63 26.18 KM Plot
KIRP rs7226893 chr18:71828844 G/C 4.36E-10 279 26.37 22.07 5.9 KM Plot
KIRP rs7229055 chr18:32838807 T/C 6.03E-5 288 10.7 29.5 25.53 KM Plot
KIRP rs7245590 chr19:16510279 C/T 8.91E-5 283 25.97 21.43 12.1 KM Plot
KIRP rs7250165 chr19:16490595 G/T 0.000157 285 12.1 20.9 26 KM Plot
KIRP rs7251554 chr19:16490594 A/C 0.000157 285 12.1 20.9 26 KM Plot
KIRP rs7252615 chr19:19157428 C/T 5.46E-5 289 25.78 27.75 25.5 KM Plot
KIRP rs72542460 chr6:110797952 A/T 0.000108 285 25.7 25.82 12.87 KM Plot
KIRP rs72563836 chr6:148645647 C/T 7.08E-5 284 26.37 17.47 18.2 KM Plot
KIRP rs72563841 chr6:148651056 T/C 0.000106 284 26.4 17.47 18.2 KM Plot
KIRP rs72563844 chr6:148653038 T/C 0.000106 284 26.38 17.17 18.2 KM Plot
KIRP rs72563846 chr6:148653772 G/T 0.000111 283 26.37 17.17 18.2 KM Plot